Transcript: ENSDART00000135259.3 ist1-202

Description

IST1 factor associated with ESCRT-III [Source:ZFIN;Acc:ZDB-GENE-030131-179]

Gene Synonyms

fb16b04, wu:fb16b04, wu:fi89e07, zgc:55671

Location

Chromosome 7: 56,472,585-56,484,798 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 15 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000051888.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000073596.7	ist1-201	2296	354aa	ENSDARP00000068086.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVT1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000135259.3	ist1-202	2267	341aa	ENSDARP00000116734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0S8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000137729.2	ist1-203	1154	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143168.2	ist1-204	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,267 bps, Translation length: 341 residues

Version

ENSDART00000135259.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135259.3 ist1-202

Summary

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Transcript: ENSDART00000135259.3 ist1-202

Summary

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