Transcript: ENSDART00000135184.2 PAFAH1B3-202

Description

platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]

Gene Synonyms

zgc:56430

Location

Chromosome 16: 11,775,141-11,779,444 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 408 variant alleles and maps to 127 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058047.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184916.1	PAFAH1B3-205	2894	268aa	ENSDARP00000153820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000141101.3	PAFAH1B3-201	2449	221aa	ENSDARP00000120580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZTU4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000060145.5	PAFAH1B3-204	2395	221aa	ENSDARP00000060144.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZTU4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136329.2	PAFAH1B3-203	326	78aa	ENSDARP00000121036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135184.2	PAFAH1B3-202	1172	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,172 bps,

Version

ENSDART00000135184.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135184.2 PAFAH1B3-202

Summary

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Transcript: ENSDART00000135184.2 PAFAH1B3-202

Summary

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