Transcript: ENSDART00000135161.2 zgc:101569-202

Description

zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]

Location

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 1 variant allele and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134975.3	zgc:101569-201	1234	309aa	ENSDARP00000116324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2G5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135161.2	zgc:101569-202	787	246aa	ENSDARP00000123827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W501	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 787 bps, Translation length: 246 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000135161.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.