Transcript: ENSDART00000135096.2 si:ch73-222f22.2-205

Description

si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]

Location

Chromosome 8: 19,214,829-19,216,657 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 144 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000095763.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135096.2	si:ch73-222f22.2-205	397	132aa	ENSDARP00000119322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5U6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000135869.3	si:ch73-222f22.2-206	1396	109aa	ENSDARP00000116947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RA68	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146162.3	si:ch73-222f22.2-208	416	68aa	ENSDARP00000114243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXJ5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000139629.2	si:ch73-222f22.2-207	1026	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 397 bps, Translation length: 132 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000135096.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135096.2 si:ch73-222f22.2-205

Summary

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Transcript: ENSDART00000135096.2 si:ch73-222f22.2-205

Summary

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