Transcript: ENSDART00000135052.3 slc8a4a-202

Description

solute carrier family 8 member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]

Location

About this transcript

This transcript has 8 exons, is annotated with 63 domains and features, is associated with 2905 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135052.3	slc8a4a-202	4448	939aa	ENSDARP00000115491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4UQV6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000077478.6	slc8a4a-201	2879	939aa	ENSDARP00000071945.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4UQV6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 4,448 bps, Translation length: 939 residues

Version

ENSDART00000135052.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.