Transcript: ENSDART00000135049.3 IQCH-201

Description

IQ motif containing H [Source:ZFIN;Acc:ZDB-GENE-050419-242]

Location

Chromosome 18: 19,820,009-19,879,981 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 8 domains and features, is associated with 1474 variant alleles and maps to 255 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000015476.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135049.3	IQCH-201	3232	1059aa	ENSDARP00000115882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXZ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000079691.5	IQCH-203	4246	1079aa	ENSDARP00000074143.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K2Q3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000147470.2	IQCH-202	580	180aa	ENSDARP00000117003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,232 bps, Translation length: 1,059 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1LXZ7

Version

ENSDART00000135049.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000135049.3 IQCH-201

Summary

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Transcript: ENSDART00000135049.3 IQCH-201

Summary

About Us

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