Transcript: ENSDART00000135034.2 slc22a21-201

Description

solute carrier family 22 member 21 [Source:ZFIN;Acc:ZDB-GENE-091118-62]

Gene Synonyms

C2, ETTzf, ergothioneine transporter, si:ch1073-409b12.4

Location

Chromosome 21: 45,904,956-45,914,224 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 222 variant alleles and maps to 79 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094112.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159841.2	slc22a21-202	1641	546aa	ENSDARP00000134313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000188242.1	slc22a21-203	6228	530aa	ENSDARP00000152461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QJH3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000135034.2	slc22a21-201	1045	319aa	ENSDARP00000121090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEF7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,045 bps, Translation length: 319 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000135034.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135034.2 slc22a21-201

Summary

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Transcript: ENSDART00000135034.2 slc22a21-201

Summary

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