Transcript: ENSDART00000135006.3 cux2b-202

Description

cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]

Gene Synonyms

cux2, si:ch211-218i18.2

Location

About this transcript

This transcript has 16 exons, is annotated with 60 domains and features, is associated with 1334 variant alleles and maps to 172 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142846.3	cux2b-203	4071	1356aa	ENSDARP00000118737.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000135006.3	cux2b-202	3716	1238aa	ENSDARP00000120983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QM72	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134378.2	cux2b-201	301	100aa	ENSDARP00000122772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSD0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,716 bps, Translation length: 1,238 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000135006.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.