Transcript: ENSDART00000135005.3 si:ch211-191a24.4-202

Description

si:ch211-191a24.4 [Source:ZFIN;Acc:ZDB-GENE-030131-4489]

Location

Chromosome 20: 6,533,260-6,540,530 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 95 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037528.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054652.7	si:ch211-191a24.4-201	1443	302aa	ENSDARP00000054651.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166356.2	si:ch211-191a24.4-204	1180	302aa	ENSDARP00000133805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKC4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135005.3	si:ch211-191a24.4-202	900	232aa	ENSDARP00000116359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145763.2	si:ch211-191a24.4-203	848	234aa	ENSDARP00000113354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 900 bps, Translation length: 232 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000135005.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000135005.3 si:ch211-191a24.4-202

Summary

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Transcript: ENSDART00000135005.3 si:ch211-191a24.4-202

Summary

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