Transcript: ENSDART00000134982.3 plp1b-204

Description

proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]

Location

Chromosome 5: 23,268,121-23,277,385 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 29 domains and features, is associated with 300 variant alleles and maps to 247 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000011929.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051533.8	plp1b-202	1717	279aa	ENSDARP00000051532.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8UUT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000003514.8	plp1b-201	1810	257aa	ENSDARP00000002599.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8UUT2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000134982.3	plp1b-204	1723	265aa	ENSDARP00000122278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000126540.3	plp1b-203	1615	245aa	ENSDARP00000104662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8UUT5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,723 bps, Translation length: 265 residues

Version

ENSDART00000134982.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134982.3 plp1b-204

Summary

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Transcript: ENSDART00000134982.3 plp1b-204

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