Transcript: ENSDART00000134957.2 larp6b-202

Description

La ribonucleoprotein 6, translational regulator b [Source:ZFIN;Acc:ZDB-GENE-041008-244]

Gene Synonyms

im:7142825, wu:fa55b04, zgc:162969

Location

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 116 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000004483.8	larp6b-201	1667	471aa	ENSDARP00000019822.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8B8W4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134957.2	larp6b-202	849	207aa	ENSDARP00000121384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8B8W0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137879.2	larp6b-203	539	134aa	ENSDARP00000118476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8B8W9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 849 bps, Translation length: 207 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000134957.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.