Transcript: ENSDART00000134893.3 cpamd8-202

Description

C3 and PZP like alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]

Gene Synonyms

si:ch211-87h14.4, si:dkey-94n12.1

Location

About this transcript

This transcript has 40 exons, is annotated with 42 domains and features, is associated with 849 variant alleles and maps to 474 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134893.3	cpamd8-202	6613	1772aa	ENSDARP00000123096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000079046.5	cpamd8-201	1563	520aa	ENSDARP00000073502.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVU6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148230.2	cpamd8-203	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 40, Coding exons: 40, Transcript length: 6,613 bps, Translation length: 1,772 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000134893.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.