Transcript: ENSDART00000134832.2 RBPMS2-207

Description

RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]

Location

Chromosome 7: 48,253,733-48,263,525 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 262 variant alleles and maps to 236 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079578.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000006619.8	RBPMS2-205	1911	200aa	ENSDARP00000026087.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147968.3	RBPMS2-204	871	179aa	ENSDARP00000122203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142370.3	RBPMS2-208	764	179aa	ENSDARP00000118336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148273.2	RBPMS2-203	317	18aa	ENSDARP00000122677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134832.2	RBPMS2-207	768	80aa	ENSDARP00000143130.1	Nonsense mediated decay	-	-
ENSDART00000135671.2	RBPMS2-201	832	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000139279.3	RBPMS2-206	502	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000136708.2	RBPMS2-202	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 768 bps, Translation length: 80 residues

Version

ENSDART00000134832.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134832.2 RBPMS2-207

Summary

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Transcript: ENSDART00000134832.2 RBPMS2-207

Summary

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