Transcript: ENSDART00000134794.3 SPATA6-201

Description

spermatogenesis associated 6 [Source:ZFIN;Acc:ZDB-GENE-050417-351]

Location

About this transcript

This transcript has 13 exons, is annotated with 10 domains and features, is associated with 399 variant alleles and maps to 163 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134794.3	SPATA6-201	1865	455aa	ENSDARP00000114482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140867.2	SPATA6-202	576	111aa	ENSDARP00000118790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137923.2	SPATA6-203	747	53aa	ENSDARP00000117721.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,865 bps, Translation length: 455 residues

Version

ENSDART00000134794.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.