Transcript: ENSDART00000134687.2 PUS1-202

Description

pseudouridine synthase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-26]

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 242 variant alleles and maps to 56 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144859.3	PUS1-201	1539	412aa	ENSDARP00000122503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134687.2	PUS1-202	881	279aa	ENSDARP00000116690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 881 bps, Translation length: 279 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000134687.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.