Transcript: ENSDART00000134597.4 usp42-201

Description

ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]

Location

About this transcript

This transcript has 19 exons, is annotated with 46 domains and features, is associated with 618 variant alleles and maps to 199 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168758.2	usp42-202	4483	1168aa	ENSDARP00000130865.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134597.4	usp42-201	4246	1168aa	ENSDARP00000117687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY38	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 4,246 bps, Translation length: 1,168 residues

Version

ENSDART00000134597.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non-submitted evidence [Definitions]