Transcript: ENSDART00000134596.2 CALHM2-201

Description

calcium homeostasis modulator family member 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081028-65]

Location

Chromosome 13: 25,418,561-25,419,572 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 124 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074179.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000185880.1	CALHM2-202	993	330aa	ENSDARP00000149219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000181925.1	CALHM2-205	969	322aa	ENSDARP00000155123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000185872.1	CALHM2-204	966	321aa	ENSDARP00000153119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000111034.4	CALHM2-203	957	318aa	ENSDARP00000100062.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134596.2	CALHM2-201	930	309aa	ENSDARP00000118691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI65	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 930 bps, Translation length: 309 residues

Version

ENSDART00000134596.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134596.2 CALHM2-201

Summary

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Transcript: ENSDART00000134596.2 CALHM2-201

Summary

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