Transcript: ENSDART00000134587.3 rcc2-202

Description

regulator of chromosome condensation 2 [Source:NCBI gene;Acc:406455]

Gene Synonyms

wu:fb36a03, zgc:77115

Location

Chromosome 23: 21,526,661-21,534,738 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 92 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000011510.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000010647.9	rcc2-201	2908	495aa	ENSDARP00000004838.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000189010.1	rcc2-204	3533	516aa	ENSDARP00000154575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QNE6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000134587.3	rcc2-202	958	233aa	ENSDARP00000115464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGE3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139092.2	rcc2-203	829	226aa	ENSDARP00000123228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCP1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 958 bps, Translation length: 233 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000134587.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134587.3 rcc2-202

Summary

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Transcript: ENSDART00000134587.3 rcc2-202

Summary

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