Transcript: ENSDART00000134574.3 hacd2-202

Description

3-hydroxyacyl-CoA dehydratase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6053]

Gene Synonyms

ptplb, wu:fi32c08, zgc:55421

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 249 variant alleles and maps to 108 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133998.3	hacd2-201	2129	244aa	ENSDARP00000119275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V199	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141998.2	hacd2-203	961	216aa	ENSDARP00000122534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWS6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134574.3	hacd2-202	725	173aa	ENSDARP00000112613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V198	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 725 bps, Translation length: 173 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000134574.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.