Transcript: ENSDART00000134564.3 srsf5b-204

Description

serine and arginine rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]

Gene Synonyms

sfrs5b, wu:fe15e05, zgc:113907, zgc:92278

Location

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 258 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134564.3	srsf5b-204	2640	285aa	ENSDARP00000122656.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHJ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000075515.6	srsf5b-202	1707	164aa	ENSDARP00000069997.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V988	-
ENSDART00000132127.3	srsf5b-203	835	158aa	ENSDARP00000115788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SPH1	-
ENSDART00000135506.2	srsf5b-205	715	138aa	ENSDARP00000123286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SPH2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000023580.7	srsf5b-201	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,640 bps, Translation length: 285 residues

Version

ENSDART00000134564.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.