Transcript: ENSDART00000134560.3 slc45a1-202

Description

solute carrier family 45 member 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2152]

Gene Synonyms

zgc:158635

Location

About this transcript

This transcript has 10 exons, is annotated with 34 domains and features, is associated with 489 variant alleles and maps to 221 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134560.3	slc45a1-202	2992	802aa	ENSDARP00000119495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EYD2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183271.1	slc45a1-204	1521	497aa	ENSDARP00000148958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QBJ1	-
ENSDART00000043016.5	slc45a1-201	1042	148aa	ENSDARP00000043015.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1V0	-
ENSDART00000173156.2	slc45a1-203	720	102aa	ENSDARP00000142373.1	Nonsense mediated decay	A0A140LGJ4	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,992 bps, Translation length: 802 residues

Version

ENSDART00000134560.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.