Transcript: ENSDART00000134495.2 RABGGTB-203

Description

Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 215 variant alleles and maps to 187 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099248.6	RABGGTB-202	1737	331aa	ENSDARP00000090020.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V946	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000099247.6	RABGGTB-201	1217	165aa	ENSDARP00000090019.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134495.2	RABGGTB-203	653	172aa	ENSDARP00000114745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 653 bps, Translation length: 172 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000134495.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.