Transcript: ENSDART00000134427.2 sh3glb2b-202

Description

SH3-domain GRB2-like endophilin B2b [Source:NCBI gene (formerly Entrezgene);Acc:394094]

Location

Chromosome 5: 31,659,141-31,689,880 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 1008 variant alleles and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035470.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147065.3	sh3glb2b-203	1257	402aa	ENSDARP00000114502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CEP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000184319.1	sh3glb2b-206	5483	406aa	ENSDARP00000146608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q0C3	-
ENSDART00000190229.1	sh3glb2b-208	5447	394aa	ENSDARP00000155783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QMQ9	-
ENSDART00000186294.1	sh3glb2b-207	5432	389aa	ENSDARP00000155270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000098172.6	sh3glb2b-201	1920	373aa	ENSDARP00000088944.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q802U5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000170313.2	sh3glb2b-205	1201	397aa	ENSDARP00000137042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000134427.2	sh3glb2b-202	798	238aa	ENSDARP00000119047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147139.2	sh3glb2b-204	851	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 798 bps, Translation length: 238 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000134427.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134427.2 sh3glb2b-202

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Transcript: ENSDART00000134427.2 sh3glb2b-202

Summary

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