Transcript: ENSDART00000134337.2 exoc2-202

Description

exocyst complex component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1160]

Gene Synonyms

sec5l1, zgc:63558

Location

About this transcript

This transcript has 10 exons, is annotated with 4 domains and features, is associated with 278 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077962.6	exoc2-201	3076	918aa	ENSDARP00000072428.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134337.2	exoc2-202	797	266aa	ENSDARP00000121614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5Y1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000145355.2	exoc2-203	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 797 bps, Translation length: 266 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000134337.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.