Transcript: ENSDART00000134320.3 skp2-203

Description

S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]

Gene Synonyms

id:ibd5121, sb:cb933, wu:fa10b08, wu:fj97b11, zgc:162950

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 228 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101751.5	skp2-201	2179	410aa	ENSDARP00000092527.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KP53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134320.3	skp2-203	791	264aa	ENSDARP00000114755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDJ7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000140520.2	skp2-205	705	114aa	ENSDARP00000123198.1	Nonsense mediated decay	E9QCZ4	-
ENSDART00000136904.2	skp2-204	553	85aa	ENSDARP00000120703.1	Nonsense mediated decay	E9QJ20	-
ENSDART00000131624.2	skp2-202	316	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 791 bps, Translation length: 264 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000134320.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.