Transcript: ENSDART00000134311.3 VPS8-201

Description

VPS8 subunit of CORVET complex [Source:ZFIN;Acc:ZDB-GENE-060503-348]

Location

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 2301 variant alleles and maps to 83 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143639.3	VPS8-203	4399	1412aa	ENSDARP00000117166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000101779.6	VPS8-204	1528	455aa	ENSDARP00000092555.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000146783.2	VPS8-202	830	235aa	ENSDARP00000113658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134311.3	VPS8-201	687	146aa	ENSDARP00000120853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 687 bps, Translation length: 146 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000134311.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.