Transcript: ENSDART00000134303.2 lin54-202

Description

lin-54 DREAM MuvB core complex component [Source:NCBI gene;Acc:560688]

Gene Synonyms

lin-54 homolog, zgc:152921

Location

About this transcript

This transcript has 3 exons, is associated with 215 variant alleles and maps to 31 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092110.6	lin54-201	3391	771aa	ENSDARP00000086543.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDM3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191847.1	lin54-204	6527	747aa	ENSDARP00000146639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PZG5	-
ENSDART00000135527.2	lin54-203	890	211aa	ENSDARP00000123209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCP6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134303.2	lin54-202	475	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 475 bps,

Version

ENSDART00000134303.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.