Transcript: ENSDART00000134190.2 SORT1-202

Description

sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]

Location

About this transcript

This transcript has 20 exons, is annotated with 20 domains and features, is associated with 913 variant alleles and maps to 302 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134190.2	SORT1-202	4557	828aa	ENSDARP00000119088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143667.2	SORT1-201	694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,557 bps, Translation length: 828 residues

Version

ENSDART00000134190.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.