Transcript: ENSDART00000134117.3 RBBP9-201

Description

retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]

Location

Chromosome 22: 38,946,439-38,951,354 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 374 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040713.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104423.6	RBBP9-203	1390	184aa	ENSDARP00000095196.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MT41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000085685.6	RBBP9-205	2904	184aa	ENSDARP00000080120.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MT41	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134117.3	RBBP9-201	1198	120aa	ENSDARP00000117984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000104422.5	RBBP9-204	471	156aa	ENSDARP00000095195.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000131462.2	RBBP9-202	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,198 bps, Translation length: 120 residues

Version

ENSDART00000134117.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134117.3 RBBP9-201

Summary

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Transcript: ENSDART00000134117.3 RBBP9-201

Summary

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