Transcript: ENSDART00000134097.4 nid2b-202

Description

nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]

Location

About this transcript

This transcript has 19 exons, is annotated with 63 domains and features, is associated with 1153 variant alleles and maps to 197 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000134097.4	nid2b-202	3546	1155aa	ENSDARP00000119933.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000023809.9	nid2b-201	2570	506aa	ENSDARP00000019482.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152692.2	nid2b-203	768	70aa	ENSDARP00000126978.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,546 bps, Translation length: 1,155 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000134097.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.