Transcript: ENSDART00000134072.2 cnot2-202

Description

CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]

Gene Synonyms

zgc:162316

Location

Chromosome 25: 28,679,680-28,683,722 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 291 variant alleles and maps to 27 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061802.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088383.7	cnot2-201	2233	520aa	ENSDARP00000082816.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QN63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139965.3	cnot2-203	693	173aa	ENSDARP00000112926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCV7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134072.2	cnot2-202	566	110aa	ENSDARP00000117431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE21	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148366.2	cnot2-204	563	188aa	ENSDARP00000118983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7P0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 566 bps, Translation length: 110 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000134072.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134072.2 cnot2-202

Summary

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Transcript: ENSDART00000134072.2 cnot2-202

Summary

About Us

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