Transcript: ENSDART00000134053.4 USP2-204

Description

ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]

Location

Chromosome 15: 20,900,627-20,916,251 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 280 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020107.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134053.4	USP2-204	2641	394aa	ENSDARP00000119800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2P1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152371.3	USP2-205	1274	311aa	ENSDARP00000126710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152648.3	USP2-203	888	238aa	ENSDARP00000126829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152448.2	USP2-201	665	162aa	ENSDARP00000126833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152244.2	USP2-202	434	71aa	ENSDARP00000126799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,641 bps, Translation length: 394 residues

Version

ENSDART00000134053.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000134053.4 USP2-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000134053.4 USP2-204

Summary

About Us

Get help

Our sister sites

Follow us