Transcript: ENSDART00000134037.3 tcea3-202

Description

transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860]

Gene Synonyms

zgc:77732

Location

About this transcript

This transcript has 10 exons, is annotated with 23 domains and features, is associated with 417 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000006061.10	tcea3-201	1842	409aa	ENSDARP00000013575.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P0U5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134037.3	tcea3-202	1055	305aa	ENSDARP00000118795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI11	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140552.2	tcea3-203	697	201aa	ENSDARP00000121141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QED3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,055 bps, Translation length: 305 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000134037.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.