Transcript: ENSDART00000134000.2 TMEM62-202

Description

transmembrane protein 62 [Source:ZFIN;Acc:ZDB-GENE-040426-1837]

Location

About this transcript

This transcript has 14 exons, is associated with 1061 variant alleles and maps to 140 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000076004.7	TMEM62-201	2316	639aa	ENSDARP00000070483.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FFQ5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134000.2	TMEM62-202	2282	358aa	ENSDARP00000124222.1	Nonsense mediated decay	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 14, Coding exons: 9, Transcript length: 2,282 bps, Translation length: 358 residues

Version

ENSDART00000134000.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.