Transcript: ENSDART00000133992.3 STAU1-202

Description

staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]

Location

About this transcript

This transcript has 15 exons, is annotated with 40 domains and features, is associated with 802 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181056.1	STAU1-204	3131	702aa	ENSDARP00000148866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1PJS2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000064865.4	STAU1-203	3092	636aa	ENSDARP00000064864.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000133992.3	STAU1-202	3066	690aa	ENSDARP00000116967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5V4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144569.3	STAU1-201	840	171aa	ENSDARP00000113751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,066 bps, Translation length: 690 residues

Version

ENSDART00000133992.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.