Transcript: ENSDART00000133979.4 si:ch211-214c7.5-202

Description

si:ch211-214c7.5 [Source:ZFIN;Acc:ZDB-GENE-061207-16]

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 17 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000101410.6	si:ch211-214c7.5-201	1870	344aa	ENSDARP00000092184.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133979.4	si:ch211-214c7.5-202	1110	188aa	ENSDARP00000122525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000141756.3	si:ch211-214c7.5-203	608	177aa	ENSDARP00000121311.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,110 bps, Translation length: 188 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133979.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.