Transcript: ENSDART00000133955.3 mapk4-203

Description

mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]

Gene Synonyms

ERK4, wu:fi27d11, zgc:55498

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 605 variant alleles and maps to 51 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020621.7	mapk4-202	2619	674aa	ENSDARP00000011941.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V360	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185144.1	mapk4-204	6874	674aa	ENSDARP00000144829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V360	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133955.3	mapk4-203	1101	246aa	ENSDARP00000115527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V361	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,101 bps, Translation length: 246 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000133955.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.