Transcript: ENSDART00000133946.2 si:dkey-147f3.8-206

Description

si:dkey-147f3.8 [Source:ZFIN;Acc:ZDB-GENE-061009-32]

Location

Chromosome 23: 16,908,012-16,918,191 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 321 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000092166.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145275.3	si:dkey-147f3.8-210	1362	405aa	ENSDARP00000116121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5J5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133946.2	si:dkey-147f3.8-206	1145	300aa	ENSDARP00000113046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0B1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000104793.3	si:dkey-147f3.8-205	1003	321aa	ENSDARP00000095563.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9Z7	-
ENSDART00000139286.2	si:dkey-147f3.8-207	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146895.3	si:dkey-147f3.8-211	789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000140373.2	si:dkey-147f3.8-209	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139952.2	si:dkey-147f3.8-208	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,145 bps, Translation length: 300 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133946.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133946.2 si:dkey-147f3.8-206

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Transcript: ENSDART00000133946.2 si:dkey-147f3.8-206

Summary

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