Transcript: ENSDART00000133857.2 cst3-202

Description

cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]

Location

About this transcript

This transcript has 2 exons, is associated with 229 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065435.6	cst3-201	1320	128aa	ENSDARP00000065434.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4C9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136820.3	cst3-203	719	134aa	ENSDARP00000113296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000133857.2	cst3-202	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 643 bps,

Version

ENSDART00000133857.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.