Transcript: ENSDART00000133855.3 trpm2-201

Description

si:dkey-240n22.1 [Source:NCBI gene;Acc:103908651]

Gene Synonyms

si:ch73-263b18.1

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 47 variant alleles and maps to 61 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135345.5	trpm2-202	4728	1078aa	ENSDARP00000118689.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NMI9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172592.2	trpm2-203	3329	656aa	ENSDARP00000137714.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4INU4	-
ENSDART00000133855.3	trpm2-201	367	107aa	ENSDARP00000116955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S5A1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 367 bps, Translation length: 107 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000133855.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.