Transcript: ENSDART00000133787.3 cd4-1-202

Description

CD4-1 molecule [Source:ZFIN;Acc:ZDB-GENE-100922-280]

Location

Chromosome 16: 11,911,897-11,946,139 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 20 domains and features, is associated with 1415 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070668.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133787.3	cd4-1-202	2043	474aa	ENSDARP00000121210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZB1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000103975.5	cd4-1-201	2019	474aa	ENSDARP00000094750.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZB1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183229.1	cd4-1-203	1863	474aa	ENSDARP00000149025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZB1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 2,043 bps, Translation length: 474 residues

Version

ENSDART00000133787.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133787.3 cd4-1-202

Summary

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Transcript: ENSDART00000133787.3 cd4-1-202

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