Transcript: ENSDART00000133760.2 HOXC11-201

Description

homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]

Location

About this transcript

This transcript has 2 exons, is annotated with 18 domains and features, is associated with 95 variant alleles and maps to 316 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103146.4	HOXC11-202	1512	306aa	ENSDARP00000093920.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQI4 Q58EL0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133760.2	HOXC11-201	1955	302aa	ENSDARP00000120202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,955 bps, Translation length: 302 residues

Version

ENSDART00000133760.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.