Transcript: ENSDART00000133755.2 srsf1a-202

Description

serine and arginine rich splicing factor 1a [Source:NCBI gene;Acc:406288]

Gene Synonyms

sfrs1a, sfrs1l, wu:fb52g10, wu:fb97g12, zgc:66146

Location

About this transcript

This transcript has 4 exons, is annotated with 17 domains and features, is associated with 222 variant alleles and maps to 202 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080413.7	srsf1a-201	2171	257aa	ENSDARP00000074862.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133755.2	srsf1a-202	770	193aa	ENSDARP00000115420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGF8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135658.2	srsf1a-203	543	116aa	ENSDARP00000113721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIC5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137058.2	srsf1a-204	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 770 bps, Translation length: 193 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000133755.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.