Transcript: ENSDART00000133677.2 rbm25a-201

Description

RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB-GENE-090312-142]

Location

Chromosome 13: 32,997,020-33,000,649 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 198 variant alleles and maps to 217 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039266.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000179859.1	rbm25a-205	1254	417aa	ENSDARP00000156592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183671.1	rbm25a-206	1352	361aa	ENSDARP00000145251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000134140.2	rbm25a-202	1040	347aa	ENSDARP00000112834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000133677.2	rbm25a-201	896	80aa	ENSDARP00000119393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147165.2	rbm25a-204	723	178aa	ENSDARP00000112585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141140.2	rbm25a-203	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 896 bps, Translation length: 80 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133677.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133677.2 rbm25a-201

Summary

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Transcript: ENSDART00000133677.2 rbm25a-201

Summary

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