Transcript: ENSDART00000133661.3 tasp1-201

Description

taspase, threonine aspartase, 1 [Source:ZFIN;Acc:ZDB-GENE-070424-242]

Gene Synonyms

si:dkey-38k3.3

Location

Chromosome 13: 34,689,663-34,750,299 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 8 domains and features, is associated with 1434 variant alleles and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060580.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133661.3	tasp1-201	6088	422aa	ENSDARP00000123428.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000182978.1	tasp1-203	1230	409aa	ENSDARP00000150433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QBP8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000136424.3	tasp1-202	905	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 6,088 bps, Translation length: 422 residues

Version

ENSDART00000133661.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000133661.3 tasp1-201

Summary

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Transcript: ENSDART00000133661.3 tasp1-201

Summary

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