Transcript: ENSDART00000133628.4 ankib1a-201

Description

ankyrin repeat and IBR domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060503-156]

Location

About this transcript

This transcript has 19 exons, is annotated with 34 domains and features, is associated with 1575 variant alleles and maps to 181 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168725.2	ankib1a-202	3466	1060aa	ENSDARP00000132490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8G6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000133628.4	ankib1a-201	4059	1037aa	ENSDARP00000119624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 4,059 bps, Translation length: 1,037 residues

Version

ENSDART00000133628.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.