Transcript: ENSDART00000133572.2 si:ch73-90k17.1-201

Description

si:ch73-90k17.1 [Source:ZFIN;Acc:ZDB-GENE-090312-218]

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 19 variant alleles and maps to 106 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133572.2	si:ch73-90k17.1-201	1311	404aa	ENSDARP00000122579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JLU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149629.2	si:ch73-90k17.1-202	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,311 bps, Translation length: 404 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000133572.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.