Transcript: ENSDART00000133453.3 serbp1a-202

Description

SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]

Gene Synonyms

hm:zeh0245, ndufb9, serbp1, wu:fa12d05, wu:fb36e07, wu:fc16f12, wu:fj13e12, zgc:55489

Location

Chromosome 6: 34,932,623-34,938,707 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 43 variant alleles and maps to 222 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074242.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131610.2	serbp1a-201	2344	392aa	ENSDARP00000115589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5Q3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000186689.1	serbp1a-206	2270	391aa	ENSDARP00000149304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q802Z9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140147.3	serbp1a-204	790	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140334.2	serbp1a-205	767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133453.3	serbp1a-202	767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135425.2	serbp1a-203	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 767 bps,

Version

ENSDART00000133453.3

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133453.3 serbp1a-202

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Transcript: ENSDART00000133453.3 serbp1a-202

Summary

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