Transcript: ENSDART00000133413.2 vcla-203

Description

vinculin a [Source:ZFIN;Acc:ZDB-GENE-050506-61]

Gene Synonyms

hm:zehn2160, im:6902790, vcl

Location

About this transcript

This transcript has 2 exons, is associated with 122 variant alleles and maps to 69 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124167.4	vcla-202	4069	1131aa	ENSDARP00000105799.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JIH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000039828.6	vcla-201	3756	1066aa	ENSDARP00000039827.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NHA0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133413.2	vcla-203	491	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 491 bps,

Version

ENSDART00000133413.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.