Transcript: ENSDART00000133388.3 mlh1-201

Description

mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]

Gene Synonyms

zgc:66301

Location

About this transcript

This transcript has 20 exons, is annotated with 20 domains and features, is associated with 548 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133388.3	mlh1-201	2318	725aa	ENSDARP00000113460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6F5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147996.2	mlh1-202	778	215aa	ENSDARP00000121589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6F4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,318 bps, Translation length: 725 residues

Version

ENSDART00000133388.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.